Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797364.1_cds_XP_016454907.1_4848

CDS Infomation

[gene=LOC107779080] [db_xref=GeneID:107779080] [protein=LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016454907.1] [location=complement(join(<1808..1856,2016..2122,2240..2293,2363..2407,3304..3501,3593..3666,3916..4013,4142..4271,4354..5356,5359..5759,6020..6086,7115..7311,7435..7450,7542..7704,7777..7869,7982..8039,8123..8180,8270..8424,13887..13934,14041..14092,14854..14979))] [gbkey=CDS]

Sequence

ATGGGAAGCATTAAGCGATTGCCTGAGGGCATTCGGAGTTCGATTCGATCAGGGGTTATA
TTGTATGATTTCACAAGGGTTGTTGAGGAGTTGGTTTTCAACAGCCTTGATGCTGGTGCT
ACCAAGGTATATGTTGCTCTTAGTGTTGGGACCTGCTATGTTAAGGTGGATGACAACGGA
TCTGGTGTTTCACGAGATGGACTGGTGCTGATAGGAGAAAGATATGTGACATCAAAATAC
AGACACTTGGATGATGTGCATGCTTTCCCAGCAAGCTTTGGCTTTAAAGGAGAGGCTCTG
AGCTCTATTTCTGATGTTTCTTTGTTGGAAATTGTTACTAAAACTCACGGAAAGCCAAAT
GGATATCGTAAGGTTTTGAAGGACGGCAAGTGTTTGTATCTTGGAATTGATGATGATAGA
CAAGATGTTGGTACAACGGTCATTGTTCGTGATTTATTTTACAACCAACCAGTTCGAAGG
AAGCAAATGCTCTCCAACCCAAAGAGGATCTTGCATTCCGTGAAAGAGTGTCTGCTAAGA
ATTGCCTTTGTGCATCCCAGTGTCTCCTTCAGAATTGTTGATATTGAAAGTGAGGATGAC
CTGCTTTGCACGCGTGCTTCTCCTTCTCCATTGCCGCTGTTGTCCGGTGGGTTTGCGATT
CAGGATTTGAGCTCCCTAAACAAACTGAATGCAAGTGATGGTTCATTCAAGCTCTCCGGA
TACATCTCAGGTCCTGATGTTTACCCAATGAAGGTCCTTCAATATTTCTACATCAATTTA
AGATTTGTTTCCAAGGGACCAATACATAAACTACTCAATAACTTAGCAATGAGCTTTGAC
AGCGCTTCTGACATTGAGCGGCGAAGTAGCTCCCAGATATATCCACTGTTTTTGTTGAAC
CTAAACTGCCCAAGATCTTCTTATGATTTAACTTTGGAGCCATCAAAGACCTCTGTGGAA
TTTAAGGATTGGTGCCCTGTCCTTTCCTTTATTGAAGATACTGTCACGAATCTATGGGCT
GAAAATAACTCTGATATGCCTATGAATCATGAGATCAGGAAAAAGAGGTGCAGGGCCCGG
AGTTGCAAACCTACGCTTGAGCTTTCTTCCCCTCAGCCAAAGAAACTAACTGAAGAGTGC
TCTGTCAGGAGAGAGATTCAATCTTCGCAGAATATTCTGTGGGGAAGTGCTTCTGAAAAG
CATGATCCTAAGTCCAGATTTCTCTGTCAGACTGAAAGTTCAAATCGGTCAATTGATGGA
TCTCTTGCTCGTCGCACAATGGGGGTGAACTGGAAATCCGGAAACTCTCCCCAGCCTTTT
TCATCTAATGTTTTCTCTATAGGGGATGATTTCCTGGATAACAAATTCAATTCTCCAGCT
AGCTCCAGTCATAAATCAGACTGCCCGTTAGTTCAGGATGGGAGGATGAGTGCCACAATT
GTTGCTGAGAGATCAACAGAGGAAGCCTCGTTTATGGAGTCTCTTGAGCTTGATGATAGT
TCAAATGTGATGCATGACAGAAGGAAACCATTTATGCAGAGTTGTTCTTTGCGTAGAAGC
CTGATACATGATGGAGCATCTTTTGATAGTGATGAAGATATTAAACTTAAAAGAAGTGAT
TACAGAATTAAACGAGATCTCCTTGAAGGTGATTACAGTGTTGAATTTGAAGTAGTTGAT
GATATTAACCAGGTCCCAAATCAAAGGTTTCCTAGGGGCAAGGAGCTATATTTTGAAAAT
TTCTCCAGGTGCAAAACTCAAAGCAAGGACATTCTAGATGAAGACAATTATCTTCTTGAC
TTTGTTAAACAGACTGAAAATTATGGTTCTAGTCAGCTGCCTTTTAGTTCAGATCCATGT
CCGCTGCTACCAGATCCTTCGCTTGGGACCAGGTTTCAAGATGTTGATCCTTATATTGCT
GAAAAGGGGATTGAAACTTCTGTTAAAGATGAACTTGGTGTCACGTATAATTTTGGAAAA
CATAATCTCCTGGTTCCTACCATAAACAATTTGGGAAAAGAGGACTGCTTGTTCCCAAGT
TTTGCAAAGTTTGGTCTCAATTTTAATGCTTATTCTAGGGAGGATATGGGCAGAATAGGG
GGTCATGATCCACAGGACATTTATAGTTCAGGTCCTTCTGAACTCTATTATGATGGAGAT
GATTTGTCACATATACATTCTCATGGTGAAGAAAATCTTAATAATTATTTGATACCACGA
GCTATGCTCTCCTCTAGGGTGGATGAGGACTCGCATAAATGGATTGATACAGGAAATCAA
GGTAAAACAGATAAGCTACTAAGGAAGAGGAGAAGAAGTCATTCAGCTCCTCCGTTTTAC
CAAGGCAAGAAGAAGTTCTTTTCCATGAGTGAGTCTTTAAGAAAAGCAGCAGGAAATAAC
AACCTTAAGACTGTTCATGATGCGCCACTCATGCCAGAAACTAGTGCTGCAAGGAGACTG
CAACATTCAGCAGAAGCTGTTAACTGGGAGCTTCCACAGCAGTCATCCTATCAATGTGAT
CAATCTTCCACCCCAAGTTGTGGTGACGGTATATTCTCTAATGTCAGGCCAAATGTGAAA
ATGAAACTTGTTAACACCTGGAATAGCAAATTACAAACTCAAGGGGAGGAGTGCACTAGT
ACACACAATCTGGAGTCAAAAGAAGAATTTGCATCAACAAAAACTCAAAATTTCTTAGAT
TCTGGGGCGAAATGGAGGGACTACCGTCCAGAGACTGCACGTGGGAGTGGAGCAGAGGAT
CTTAAGAATCAGGATACCATACTCAATGTCACTTCTGGCATCTTGCATTTTGTTGGCAAT
TCATTGGTTCCTGATACCATTGATAAAAACTACCTGGAGGGTGCCAAAGTTCTCCAACAG
GTTGATAAGAAGTATATTCCGATTGTGGCGGGCACAACTCTTGCTATAATTGATCAGCAT
GCTGCAGATGAGCGAATTCGTTTGGAAGAACTGCGTGAGAAGGTTCTATCTGGACAAATG
AGGACAACTACATATCTTGATTCCGAACAAGAATTGGTTATGCCCGAAATTGGTTACCAG
TTACTACACAACTATGCTGAACAAATTCAAAACTGGGGTTGGATTTGCAACGTTCATTCT
CAAGCTTCAAGATCATTTACCAGGAACTTAAATCTGATCCACAAGAAGCCAAAAGCAGTC
ACACTTCTTGCG

Peptide Sequence

PEP ID

XP_016454907.1

PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3-like, partial [Nicotiana tabacum]

Sequence

MGSIKRLPEGIRSSIRSGVILYDFTRVVEELVFNSLDAGATKVYVALSVGTCYVKVDDNG
SGVSRDGLVLIGERYVTSKYRHLDDVHAFPASFGFKGEALSSISDVSLLEIVTKTHGKPN
GYRKVLKDGKCLYLGIDDDRQDVGTTVIVRDLFYNQPVRRKQMLSNPKRILHSVKECLLR
IAFVHPSVSFRIVDIESEDDLLCTRASPSPLPLLSGGFAIQDLSSLNKLNASDGSFKLSG
YISGPDVYPMKVLQYFYINLRFVSKGPIHKLLNNLAMSFDSASDIERRSSSQIYPLFLLN
LNCPRSSYDLTLEPSKTSVEFKDWCPVLSFIEDTVTNLWAENNSDMPMNHEIRKKRCRAR
SCKPTLELSSPQPKKLTEECSVRREIQSSQNILWGSASEKHDPKSRFLCQTESSNRSIDG
SLARRTMGVNWKSGNSPQPFSSNVFSIGDDFLDNKFNSPASSSHKSDCPLVQDGRMSATI
VAERSTEEASFMESLELDDSSNVMHDRRKPFMQSCSLRRSLIHDGASFDSDEDIKLKRSD
YRIKRDLLEGDYSVEFEVVDDINQVPNQRFPRGKELYFENFSRCKTQSKDILDEDNYLLD
FVKQTENYGSSQLPFSSDPCPLLPDPSLGTRFQDVDPYIAEKGIETSVKDELGVTYNFGK
HNLLVPTINNLGKEDCLFPSFAKFGLNFNAYSREDMGRIGGHDPQDIYSSGPSELYYDGD
DLSHIHSHGEENLNNYLIPRAMLSSRVDEDSHKWIDTGNQGKTDKLLRKRRRSHSAPPFY
QGKKKFFSMSESLRKAAGNNNLKTVHDAPLMPETSAARRLQHSAEAVNWELPQQSSYQCD
QSSTPSCGDGIFSNVRPNVKMKLVNTWNSKLQTQGEECTSTHNLESKEEFASTKTQNFLD
SGAKWRDYRPETARGSGAEDLKNQDTILNVTSGILHFVGNSLVPDTIDKNYLEGAKVLQQ
VDKKYIPIVAGTTLAIIDQHAADERIRLEELREKVLSGQMRTTTYLDSEQELVMPEIGYQ
LLHNYAEQIQNWGWICNVHSQASRSFTRNLNLIHKKPKAVTLLAVPCILGVNLTDVDLLE
FLQQLADTDGSSIIPPSVNR

Transcript Sequence

Gene sequence data has not been registered.